robCompositions
to remove dependencyggthemes
dependencyvlr
methodspairwise
argument to ssBetween
and ssWithin
ss
methodsbp
methodssbp.fromPDBA
with tree that clusters (1 - theta)sbp.fromADBA
with sbp.fromPropd
wrapperldaRule
commandsvlr
methodsssBetween
to calculate between-group log-ratio sums of squaresssWithin
to calculate within-group log-ratio sums of squaressbp
methodsldaRule
calculates BETWEEN / WITHIN variance pair-wisesbp.fromPDBA
returns a rooted discriminative treesbp.fromADBA
returns a distal discriminative treepropr::propd
callsbalance.plot
methodpba
methodshow
supports any SBP routinepba.predict
methodbalance
methodsbalance.fromSBP
callbalance.fromContrast
functionsbp.fromHclust
testsbp
methodssbp.subset
returns named ternary or ratio balancessbp.fromRandom
returns random binary treesbp.fromABA
returns modified PBA treesbp.fromPropd
returns theta treepba
functions within ?pba
help filepba
method help more accessiblebalance
methodsbalance
now returns an S4 object called bplot
bplot
has [[
method for backwards compatibilitybalance.fromContrast
now 2x fasterpba
methodspba.plot
no longer prints variance when y
is providedvlr
now uses less peak RAMvlr
will now replace 0s with next smallest valuebalance.fromSBP
will now replace 0s with next smallest valuepba
methodspba.show
method shows object structurepba.plot
method plots balances in 2Dvlr
function calculates log-ratio variance using matrix algebrasbp.fromPBA
function builds an SBP of principal balancespba
objectpba
function constructs pba
objectpredict
method deploys pba
modelsbp.fromHclust
creates SBP matrix from hclust
objectsbp.sort
sorts an SBP matrix predictablybalance.plot
functionboxplot.split = TRUE
balance.plot()
instead of balance()
balance()
to balance.plot()
balance()
wrapper for backwards compatibilitybalance.compute()
to balance.fromContrast()
balances()
to balance.fromSBP()
balance
methodsize.line
argument and do not set size for !weigh.var
balance
methodn.group
in presence of unique rownamesbalance
methodweigh.var
argument to weigh line width by explained variancesize.line
argument to alter line width factorbalance
methodexp(mean(log(x)))
to prevent overflowbalance
methodrobCompositions::balances
call as balances
functionreshape2::melt
call as wide2long
functionbalance
methoddata.frame
to prevent errorsbalance
methodbalance.combine
function to merge figuresbalance
function to visualize balancesAdd the following code to your website.
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