Description Usage Arguments Value
Score a directory of tile data files with a Keras model
1 2 3 |
slice_data_dir |
Directory containing sliced image .rds files |
model_params_dput_file |
Path to file containing |
model_h5_weights |
Saved h5 weights from a trained keras model, used to score the image tiles. |
score_outdir |
Path to directory where results of image scoring should be save |
compress_score_rds |
Should saved score results be compressed |
return_score |
Should list of score results be returned as an R object by the function |
verbose |
Should messages about current step being processes be printed to screen? |
List of data frame with one row for each tile, containing: List of lists containing model parameters and input 'img_data' data frame with additional column containing model predicted probabilities for each slice
If score_outdir != NULL
each list will be saved to score_outdir as an
RDS file, compressed if compress_score_rds == TRUE
.
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