Files in ttdtrang/gbnorm
Graph-based Normalization of RNA-seq data
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/graphUtils.R
R/metrics.R
R/rnaseq.R
R/simulation.R
R/sysdata.rda
R/utils.R
README.md
inst/python/sbm-w.py
inst/python/sbm.py
man/build.graph.Rd
man/cdev.Rd
man/cdev.generic.Rd
man/community.cut.Rd
man/community.gce.Rd
man/community.shell.Rd
man/community.strength.internal.Rd
man/community.volume.Rd
man/crossval.Rd
man/cv.lognorm.Rd
man/fast.condNumber.Rd
man/geom.mean.Rd
man/get.references.apcluster.Rd
man/get.references.blocks.Rd
man/get.references.dbscan.Rd
man/get.references.hclust.Rd
man/get.references.v1.Rd
man/linspace.Rd
man/measure.M.Rd
man/normalize.by.deges.Rd
man/normalize.by.deseq.Rd
man/normalize.by.poissonseq.Rd
man/normalize.by.refs.Rd
man/normalize.by.ruv_r.Rd
man/normalize.by.scaleFactors.Rd
man/normalize.by.tmm.Rd
man/normalize.by.uq.Rd
man/rank1.residuals.Rd
man/rmsd.Rd
man/simulate.counts.Rd
man/srms.Rd
man/variance.refs.Rd
tests/testthat.R
tests/testthat/.gitignore
tests/testthat/test_la.R
tests/testthat/test_metrics.R
tests/testthat/test_normalize.R
