Description Details Author(s) Examples
SNP and methylation microarrays exhibit a different distribution of signal and background intensities than expression microarrays. The flexibility of the gamma distribution suits the observed signal and background intensity distributions well, encompassing as a special case the normal-exponential convolution (the de facto standard for expression background correction). In addition, a signal/noise mixture model is implemented for empirical deconvolution of cross-hybridization between probe alleles.
Package: rGammaGamma Type: Package Version: 1.0.11 Date: 2012-12-04 License: Artistic LazyLoad: yes |
Tim Triche, Jr.<ttriche@usc.edu>
1 2 3 4 | ## not run
## foo <- methylumIDAT(barcodes, parallel=T)
## foo.bg <- methylumi.bgcorr(foo, method='goob')
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