Files in ttriche/regulatoR
robust detection of regulatoRy associations between loci and features
DESCRIPTION
NAMESPACE
R/GAFtoGR.R
R/MergedDataSet-class.R
R/SummarizedExperiment-methods.R
R/TCGARNAseqToSE.R
R/addSeqinfo.R
R/alignedToRPKM.R
R/alignedToRPM.R
R/alignedToSE.R
R/binning.R
R/clusterAndCollapse.R
R/coercions.R
R/combineSeWithNAs.R
R/cpgSmooth.R
R/df2GR.R
R/dmrFinders.R
R/dp-means.R
R/dropNonmappable.R
R/dropUnclusterables.R
R/eRrbsToSE.R
R/exonArrayAsSummarizedExperiment.R
R/exonsAsSummarizedExperiment.R
R/generateLegend.R
R/getGeneBodies.R
R/getReadsPerSite.R
R/getSNPplots.R
R/getTxS.R
R/getXplots.R
R/heatmap.minus.R
R/keepFeature.R
R/localRegression.R
R/mixFilter.R
R/plotDensity.R
R/sdSdMax.R
R/seByArm.R
R/utils.R
README.md
data/HM450.REPEATMASKER.HG19.rda
data/HM450.RPT15.HG19.rda
data/HM450.SNP15.HG19.rda
data/REFSEQ.TES.HG18.rda
data/REFSEQ.TES.HG19.rda
data/REFSEQ.TSS.HG18.rda
data/REFSEQ.TSS.HG19.rda
data/hg19.by.arm.rda
inst/scripts/getTcgaLevel1.R
man/clusterAndCollapse.Rd
man/keepFeature.Rd
man/mixFilter.Rd
man/plotDensity.Rd
man/regulatoR-package.Rd
man/seByArm.Rd
