work/hist.R
In twesleyb/Uezu2016: iBioID Proteomics from Uezu, Kanak, Bradshaw et al., 2016
data(ipsd_gene_map)
data(surprise_partition)
library(geneLists)
data(sfariAnimal)
data(uniprotSubcell)
m = 4
path="Endoplasmic reticulum"
gene_list <- uniprotSubcell
module = names(partition)[partition==m]
entrez = mapIDs(module,"uniprot","entrez",gene_map)
symbols <- mapIDs(entrez[entrez %in% gene_list[[path]]],"entrez","symbol",gene_map)
symbols
twesleyb/Uezu2016 documentation built on Jan. 28, 2021, 3:56 p.m.
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data(ipsd_gene_map)
data(surprise_partition)
library(geneLists)
data(sfariAnimal)
data(uniprotSubcell)
m = 4
path="Endoplasmic reticulum"
gene_list <- uniprotSubcell
module = names(partition)[partition==m]
entrez = mapIDs(module,"uniprot","entrez",gene_map)
symbols <- mapIDs(entrez[entrez %in% gene_list[[path]]],"entrez","symbol",gene_map)
symbols
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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