Files in twesleyb/conquerDE
What the Package Does (One Line, Title Case)
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/apply_DESeq2.R
R/apply_edgeRLRT.R
R/apply_edgeRLRTdeconv.R
R/apply_edgeRQLF.R
R/apply_edgeRzinbwave.R
R/apply_glmGamPoi.R
R/apply_limma.R
R/apply_limmaCPM.R
R/apply_wilcoxon.R
R/classes.R
R/conquerDE.R
README.md
data/L.rda
data/Satpathy2021_counts.rda
data/Satpathy2021_meta.rda
data/contrast.rda
data/counts.rda
data/filt_counts.rda
data/gene_map.rda
data/meta.rda
data/model_matrix.rda
data/zinger_res.rda
inst/REFERENCES.bib
man/conquerDE.Rd
man/conquerList-class.Rd
man/run_DESeq2.Rd
man/run_edgeRLRT.Rd
man/run_edgeRLRTdeconv.Rd
man/run_edgeRQLF.Rd
man/run_edgeRzinbwave.Rd
man/run_glmGamPoi.Rd
man/run_limma.Rd
tests/testthat.R
tests/testthat/test-conquerDE.R
vignettes/conquerDE.Rmd
vignettes/conquerDE.html
work/analysis.R
work/apply_monocle.R
work/apply_monoclecensus.R
work/apply_monoclecount.R
work/apply_zinbwaveDEseq2.R
work/apply_zingeR.R
work/benchmark.R
work/dream.Rmd
work/fgsea-tutorial.R
work/generate-mock-data.R
work/satpathy2021.R
work/test-test_de.R
work/test.R
work/zinbwave.R
work/zinger-plotBCV.R
