tests/testthat/test-conquerDE.R

In twesleyb/conquerDE: What the Package Does (One Line, Title Case)

# example test
test_that("multiplication works", {
				  expect_equal(2 * 2, 4)
})

# load data for testing
data(L)

# FIXME: these tests just check if result is data.frame!!
test_that("method='foo' fails", {
				  expect_error(conquerDE(L, method="foo"))
})

test_that("method='edgeRQLF' works", {
				  expect_s3_class(conquerDE(L, method="edgeRQLF"), "data.frame")
})

test_that("method='DESeq2' works", {
				  expect_s3_class(conquerDE(L, method="DESeq2"), "data.frame")
})

test_that("method='glmGamPoi' works", {
				  expect_s3_class(conquerDE(L, method="glmGamPoi"), "data.frame")
})

test_that("method='limma' works", {
				  expect_s3_class(conquerDE(L, method="limma"), "data.frame")
})

test_that("method='limmatrend' works", {
				  expect_s3_class(conquerDE(L, method="limmatrend"), "data.frame")
})

test_that("method='zinger' works", {
				  expect_s3_class(conquerDE(L, method="zinger"), "data.frame")
})