neten: neten

In twesleyb/neten: R Implementation of Network Enhancement

Description

R implementation of Network Enhancement

Usage

neten(W_in, alpha = 0.9, diffusion = 2, k = NULL)

Arguments

W_in	- input weighted N x N adjacency matrix
alpha	- regularization parameter
diffusion	- diffusion parameter, typical values are 0.5, 1.0, 1.2, 2.0
k	- number of neighbors, if NULL then defaults to ceil(20,ncol(data))

Value

re-weighted N x N adjacency matrix

Author(s)

Bo Wang, github

microbma, github

Tyler Bradshaw, github

References

Wang et al., 2018

Examples

library(neten)
data(butterfly)
neten(butterfly)

twesleyb/neten documentation built on Sept. 18, 2021, 10:16 p.m.