Files in twillis209/pidProjCode
Utility code for my work on primary immunodeficiency
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/RcppExports.R
R/back_to_back_manhattan.R
R/compute_maf_table.R
R/gaussianMixture.R
R/ggplot2_themes.R
R/gps.R
R/gwas_to_granges.R
R/load_rds_or_run.R
R/multitrack_manhattan.R
R/pidProjCode-package.R
R/run_cl_cfdr.R
R/run_cl_fcfdr.R
R/sample_iterative_data.R
R/stratified_qqplot.R
README.md
inst/extdata/igadGwas.tsv.gz
inst/extdata/pidGwas.tsv.gz
inst/extdata/sleGwas.tsv.gz
inst/extdata/ucGwas.tsv.gz
man/back_to_back_manhattan.Rd
man/bivariate_ecdf_cpp.Rd
man/bivariate_ecdf_par_cpp.Rd
man/compute_maf_table.Rd
man/ecdf_cpp.Rd
man/fyr_theme.Rd
man/gps.Rd
man/gps_maximands.Rd
man/gwas_to_granges.Rd
man/load_rds_or_run.Rd
man/mix_rexp.Rd
man/multitrack_manhattan.Rd
man/rgps.Rd
man/rmixture.Rd
man/run_cl_cfdr.Rd
man/run_cl_fcfdr.Rd
man/run_cl_fcfdr_with_log.Rd
man/stratified_qqplot.Rd
man/zoom_theme.Rd
src/.gitignore
src/Makevars
src/RcppExports.cpp
src/functions.cpp
tests/testthat.R
tests/testthat/test-bivariate_ecdf_cpp.R
tests/testthat/test-bivariate_ecdf_par_cpp.R
tests/testthat/test-ecdf_cpp.R
tests/testthat/test-gaussianMixture.R
tests/testthat/test-gps.R
tests/testthat/test-gwas_to_granges.R
tests/testthat/test-multitrack_manhattan.R
tests/testthat/test-run_cl_fcfdr.R
tests/testthat/test-stratified_qqplot.R
tests/testthat/test_back_to_back_manhattan.R
vignettes/.gitignore
vignettes/stratified_qqplot.Rmd
vignettes/using-karyoploteR.Rmd
