Files in tzina97/netMHCpanW

Interface to 'NetMHCpan'

NEWS.md R/capitalize_first_char.R R/check_alleles.R R/check_can_create_file.R R/check_fasta_file_sequence_lengths.R R/check_netMHCpan_data_url.R R/check_netmhcpan_bin_url.R R/check_netmhcpan_installation.R R/create_temp_fasta_filename.R R/create_temp_xls_filename.R R/default_params_doc.R R/download_netmhcpan_bin.R R/download_netmhcpan_data.R R/get_default_netmhcpan_bin_path.R R/get_default_netmhcpan_bin_tarfile_path.R R/get_default_netmhcpan_data_tarfile_path.R R/get_default_netmhcpan_folder.R R/get_default_netmhcpan_subfolder.R R/get_default_netmhcpan_version.R R/get_netMHCpan_data_url.R R/get_netmhcpan_alleles.R R/get_netmhcpan_archive_filename.R R/get_netmhcpan_bin_url.R R/get_netmhcpan_url.R R/install_netmhcpan.R R/install_netmhcpan_bin.R R/install_netmhcpan_bin_from_file.R R/install_netmhcpan_data.R R/install_netmhcpan_data_from_file.R R/install_netmhcpan_from_files.R R/is_netmhcpan_haplotype.R R/is_netmhcpan_installed.R R/is_on_travis.R R/is_url_valid.R R/netMHCpan_report.R R/netmhcpan.R R/netmhcpan_self_test.R R/predict_ic50.R R/predict_ic50s.R R/read_netmhcpan_xls_output.R R/run_netmhcpan.R R/set_up_netmhcpan.R R/to_netmhcpan_name.R R/uninstall_netmhcpan.R README.md man/capitalize_first_char.Rd man/check_alleles.Rd man/check_can_create_file.Rd man/check_fasta_file_sequence_lengths.Rd man/check_netmhcpan_bin_url.Rd man/check_netmhcpan_data_url.Rd man/check_netmhcpan_installation.Rd man/create_temp_fasta_filename.Rd man/create_temp_xls_filename.Rd man/default_params_doc.Rd man/download_netmhcpan_bin.Rd man/get_default_netmhcpan_bin_path.Rd man/get_default_netmhcpan_bin_tarfile_path.Rd man/get_default_netmhcpan_folder.Rd man/get_default_netmhcpan_subfolder.Rd man/get_default_netmhcpan_version.Rd man/get_netmhcpan_alleles.Rd man/get_netmhcpan_archive_filename.Rd man/get_netmhcpan_bin_url.Rd man/get_netmhcpan_data_url.Rd man/get_netmhcpan_url.Rd man/install_netmhcpan.Rd man/install_netmhcpan_bin.Rd man/install_netmhcpan_bin_from_file.Rd man/install_netmhcpan_data.Rd man/install_netmhcpan_data_from_file.Rd man/install_netmhcpan_from_files.Rd man/is_netmhcpan_bin_installed.Rd man/is_netmhcpan_data_installed.Rd man/is_netmhcpan_haplotype.Rd man/is_netmhcpan_installed.Rd man/is_netmhcpan_set_up.Rd man/is_on_travis.Rd man/is_tcsh_installed.Rd man/is_url_valid.Rd man/netmhcpan.Rd man/netmhcpan_report.Rd man/netmhcpan_self_test.Rd man/predict_ic50.Rd man/predict_ic50s.Rd man/read_netmhcpan_xls_output.Rd man/run_netmhcpan.Rd man/set_up_netmhcpan.Rd man/to_netmhcpan_name.Rd man/uninstall_netmhcpan.Rd scripts/issue_3.R tests/spelling.R tests/testthat.R tests/testthat/test-capitalize_first_char.R tests/testthat/test-check_alleles.R tests/testthat/test-check_can_create_file.R tests/testthat/test-check_fasta_file_sequence_lengths.R tests/testthat/test-check_netMHCpan_data_url.R tests/testthat/test-check_netMHCpan_installation.R tests/testthat/test-check_netmhcpan_bin_url.R tests/testthat/test-create_temp_fasta_filename.R tests/testthat/test-create_temp_xls_filename.R tests/testthat/test-download_netMHCpan.R tests/testthat/test-get_default_netMHCpan_bin_path.R tests/testthat/test-get_default_netMHCpan_bin_tarfile_path.R tests/testthat/test-get_default_netMHCpan_data_tarfile_path.R tests/testthat/test-get_default_netMHCpan_folder.R tests/testthat/test-get_default_netMHCpan_subfolder.R tests/testthat/test-get_default_netMHCpan_version.R tests/testthat/test-get_netMHCpan_archive_filename.R tests/testthat/test-get_netMHCpan_bin_url.R tests/testthat/test-get_netMHCpan_data_url.R tests/testthat/test-get_netmhcpan_alleles.R tests/testthat/test-install_netMHCpan.R tests/testthat/test-install_netMHCpan_bin.R tests/testthat/test-install_netMHCpan_bin_from_file.R tests/testthat/test-install_netMHCpan_data.R tests/testthat/test-install_netMHCpan_data_from_file.R tests/testthat/test-install_netMHCpan_from_files.R tests/testthat/test-is_netMHCpan_bin_installed.R tests/testthat/test-is_netMHCpan_set_up.R tests/testthat/test-is_netmhcpan_haplotype.R tests/testthat/test-is_netmhcpan_installed.R tests/testthat/test-is_url_valid.R tests/testthat/test-netMHCpan_report.R tests/testthat/test-netMHCpan_self_test.R tests/testthat/test-predict_ic50.R tests/testthat/test-predict_ic50s.R tests/testthat/test-read_netMHCpan_xls_output.R tests/testthat/test-run_netMHCpan.R tests/testthat/test-set_up_netMHCpan.R tests/testthat/test-to_netMHCpan_name.R tests/testthat/test-uninstall_netMHCpan.R tests/testthat/test_download_data.R vignettes/demo.Rmd