inputCaseA: Simulated dose-response assay data (Case A)

Description Usage Format Value Source

Description

This is an example dataset corresponding to Case A. The data was generated by the python script "generate_data.py" found in the "inst/scripts/" directory. This object is meant to be used as the "inputData" argument for the GRfit function when "case" is equal to "A" (the default option). The input data for "Case A" of the GRfit function must be in this format with columns named "concentration", "cell_count", "cell_count__ctrl", and "cell_count__time0" as well as columns for other key variables. The columns "cell_line", "agent", "perturbation", "replicate", and "time" are simply examples of these key variables. It is not necessary that your input data frame include these exact column names or the same number of columns.

Usage

1

Format

A data frame with 1008 rows and 9 variables:

Value

An example dataset in the form of "Case A" generated for use with GRfit

Source

/inst/scripts/generate_data.py


uc-bd2k/GRmetrics_old documentation built on May 3, 2019, 2:13 p.m.