uclahs-cds/public-R-bedr: Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix'

Genomic regions processing using open-source command line tools such as 'BEDTools', 'BEDOPS' and 'Tabix'. These tools offer scalable and efficient utilities to perform genome arithmetic e.g indexing, formatting and merging. bedr API enhances access to these tools as well as offers additional utilities for genomic regions processing.

Getting started

Package details

Maintainer
LicenseGPL-2
Version1.1.3
URL https://github.com/uclahs-cds/package-bedr
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("uclahs-cds/public-R-bedr")
uclahs-cds/public-R-bedr documentation built on June 1, 2025, 10:21 p.m.