Files in umccr/pebbles
Datasets for running tests and examples in the rock R package
.Rbuildignore
.github/.gitignore
.github/workflows/conda.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/data.R
R/pebbles-package.R
README.md
bump.sh
data-raw/HCC2218_truthset_cnv_bcbio.R
data-raw/chr_info.R
data-raw/circos_data.R
data-raw/cytoband_data.R
data/chr_info.rda
data/circos_data.rda
data/cytoband_data.rda
deploy/conda-recipe/build.sh
deploy/conda-recipe/meta.yaml
inst/extdata/HCC2218-cnvkit_chr22_1K.cnr
inst/extdata/HCC2218_baf.tsv
inst/extdata/HCC2218_cnvkit-call.cns
inst/extdata/HCC2218_facets_cncf.tsv
inst/extdata/HCC2218_manta.vcf
inst/extdata/HCC2218_purple.cnv.tsv
inst/extdata/HCC2218_titan.segs.tsv
inst/extdata/HCC2218_truthset_cnv_bcbio.tsv
inst/extdata/az300.bed
inst/extdata/manta_no_bpi.vcf
inst/templates/circos/circos_baf_cnv_sv.conf
inst/templates/circos/circos_cnv.conf
inst/templates/circos/circos_cnvsv.conf
inst/templates/circos/circos_sv.conf
inst/templates/circos/gaps.txt
inst/templates/circos/hg38/circos_sv.conf
inst/templates/circos/hg38/gaps.txt
inst/templates/circos/hg38/ideogram.conf
inst/templates/circos/ideogram.conf
man/chr_info.Rd
man/circos_data.Rd
man/cytoband_data.Rd
man/pebbles-package.Rd
pebbles.Rproj
