extract_phewas: Extract information from IEU GWAS database
In universe77/mr.ios: Index of Suspicion
Description
Usage
Arguments
Value
View source: R/extract_phewas.R
Description
Returns traits which will be used in making background dataset. The data is obtained from [IEU GWAS database](https://gwas.mrcieu.ac.uk/).
Usage
1
extract_phewas(snplist = NULL, id_bg = id_bg, nsnp_per_chunk = 10)
Arguments
snplist
A list of instrumental genetic variants for the exposure.
id_bg
A list of available GWAS summary statistics.
nsnp_per_chunk
Number of SNPs to be used per phewas scanning.
Value
Data frame
universe77/mr.ios documentation built on Aug. 15, 2020, 9:14 a.m.
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Description Usage Arguments Value
View source: R/extract_phewas.R
Description
Returns traits which will be used in making background dataset. The data is obtained from [IEU GWAS database](https://gwas.mrcieu.ac.uk/).
Usage
1 | extract_phewas(snplist = NULL, id_bg = id_bg, nsnp_per_chunk = 10)
|
Arguments
snplist |
A list of instrumental genetic variants for the exposure. |
id_bg |
A list of available GWAS summary statistics. |
nsnp_per_chunk |
Number of SNPs to be used per phewas scanning. |
Value
Data frame
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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