ovarian_cancer_methylation: ovarian cancer methylation example from United Kingdom...
In ur-ctsi/RBM: RBM: a R package for microarray and RNA-Seq data analysis
Description
Usage
Format
Value
Source
References
Description
This data set contains DNA methylation level from 1000 DNA methylation loci in 8 randomly selected women with 4 ovarian cancer cases (pre-treatment) and 4 age-matched healthy controls.
Usage
1
Format
A matrix containing 1000 rows and 8 columns with each row denoting a methyaltion locus and each column denoting a subject.
Value
The ovarian cancer methylation example data set contains the following information:
IlmnID
Name of DNA methylation loci
case
Ovarian cancer patients
control
Healthy controls
Source
NCBI GEO website with access number GSE19711
References
Teschendorff AE, Menon U, Gentry-Maharaj A, Ramus SJ et al. Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer. Genome Res 2010 Apr;20(4):440-6. PMID: 20219944
ur-ctsi/RBM documentation built on Nov. 5, 2019, 11:56 a.m.
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Description Usage Format Value Source References
Description
This data set contains DNA methylation level from 1000 DNA methylation loci in 8 randomly selected women with 4 ovarian cancer cases (pre-treatment) and 4 age-matched healthy controls.
Usage
1 |
Format
A matrix containing 1000 rows and 8 columns with each row denoting a methyaltion locus and each column denoting a subject.
Value
The ovarian cancer methylation example data set contains the following information:
IlmnID |
Name of DNA methylation loci |
case |
Ovarian cancer patients |
control |
Healthy controls |
Source
NCBI GEO website with access number GSE19711
References
Teschendorff AE, Menon U, Gentry-Maharaj A, Ramus SJ et al. Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer. Genome Res 2010 Apr;20(4):440-6. PMID: 20219944
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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