Man pages for uyedaj/treeplyr
'dplyr' Functionality for Matched Tree and Data Objects
| anolis | Anole data |
| detectAllCharacters | Apply detectCharacterType over an entire matrix |
| detectCharacterType | Function to detect whether a character is continuous or... |
| dot-as_data_frame.data.frame | as_data_frame.data.frame function from the tibble package |
| dot-check_names_df | .check_names_df function from tibble package |
| dot-identifyBranches | Internal function taken from bayou |
| dot-nodeHeights | nodeHeights function from phytools |
| dot-pars2map | New version of .pars2map is faster, returns 3 elements rather... |
| dot-plotRegimes | Internal functions for painted_clades |
| dot-prepare.branches | This is an internal function modified from geiger's function... |
| dot-tipregime | Internal function to determine tip regimes: |
| dot-toSimmap | internal function from bayou |
| filter_-defunct | filter_.treedata |
| filterMatrix | Filter a matrix, returning either all continuous or all... |
| filter.treedata | Function for filtering rows from an object of class... |
| forceFactor | Function for checking whether a treedata object contains only... |
| forceNames | Force names for rows, columns, or both |
| forceNumeric | Function for checking whether a treedata object contains only... |
| getVector | A function for returning a named vector from a data frame or... |
| group_by_-defunct | group_by_.treedata |
| group_by.treedata | Function for grouping an object of class 'treedata' |
| hasNames | Row and column name check |
| make.treedata | Function for making an object of class 'treedata' |
| mutate_-defunct | mutate_.treedata |
| mutate.treedata | Function for mutating an object of class 'treedata' |
| paint_clades | Add regimes to a treedata object |
| reorder.treedata | Reorder a 'treedata' object |
| select_-defunct | select_.treedata |
| select.treedata | Function for selecting columns from an object of class... |
| slice_-defunct | slice_.treedata |
| slice.treedata | Choose rows by their ordinal position in the tbl for an... |
| summarise.treedata | Function for summarizing an object of class 'treedata' |
| tdapply | Apply a function over all treedata object columns and return... |
| treedply.treedata | Run a function on a 'treedata' object |
| treeplyr | treeplyr: 'dplyr' Functionality for Matched Tree and Data... |
| treeplyr-defunct | Defunct functions in treeplyr |
| treeply.treedata | Run a function on the phylogeny of a 'treedata' object |
