cfp_soilphys: Soil physical parameters data

In valentingar/ConFluxPro: A toolkit for soil gas analysis

Soil physical parameters data

Description

Create a cfp_soilphys object. This is a data.frame containing layered data of soil physical properties, at the minimum of the air density c_air and diffusion coefficient DS for one or multiple soil profiles. Each soil profile is uniquely identified by columns in the data.frame specified by the id_cols attribute. Each profile is further subdivided into layers by columns upper and lower (see cfp_layered_profile).

Usage

cfp_soilphys(x, ...)

## S3 method for class 'cfp_dat'
cfp_soilphys(x, ...)

## S3 method for class 'data.frame'
cfp_soilphys(x, id_cols, ...)

Arguments

x	A data.frame with (at least) the following columns: upper (cm) The upper bound of each step. lower (cm) The lower bound of each step. gas The gas of that step. DS (m^2 s^-1) The specific diffusion coefficient of that gas in that step. c_air (mol m^-3) The number density of air in that step. any of id_cols All id_cols that identify one profile uniquely.
...	Arguments passed on to cfp_profile
id_cols	Column names in data.frame that uniquely identify each profile.

Value

A cfp_soilphys object.

See Also

Other data formats: cfp_dat(), cfp_gasdata(), cfp_layered_profile(), cfp_layers_map(), cfp_profile()

Examples

cfp_soilphys(
  ConFluxPro::soilphys,
  id_cols = c("site", "Date", "gas")
)
### Also used to extract an soilphys object from cfp_dat
cfp_soilphys(ConFluxPro::base_dat)

valentingar/ConFluxPro documentation built on Dec. 1, 2024, 9:35 p.m.