estCdf: Estimate cumulative distribution for D*M models

In vandenman/DstarM: Analyze Two Choice Reaction Time Data with the D*M Method

Description

Estimate cumulative distribution for D*M models

Usage

estCdf(x)

Arguments

x	Any density function to calculate a cumulative distribution for. The code is designed for input of class DstarM but other input is also accepted. Other input can be either a matrix where columns represent densities or a single vector representing a density.

Details

Cumulative distributions functions are calculated by: cumsum(x) / sum(x). This method works well enough for our purposes. The example below shows that the ecdf functions seems to work slightly better. However, this estimates a cdf from raw data and does not transform a pdf into a cdf and is therefore not useful for D*M models.

Value

Cumulative density function(s). If the input was a matrix, a matrix of cumulative density functions is returned.

Examples

x = rnorm(1000)
xx = seq(-5, 5, .1)
approx1 = stats::ecdf(x)(xx)
approx2 = estCdf(dnorm(xx, mean(x), sd(x)))
trueCdf = pnorm(xx)
matplot(xx, cbind(trueCdf, approx1, approx2), type = c('l', 'p', 'p'),
        lty = 1, col = 1:3, pch = 1, bty = 'n', las = 1, ylab = 'Prob')
legend('topleft', legend = c('True Cdf', 'Stats Estatimation', 'DstarM Estimation'),
       col = 1:3, lty = c(1, NA, NA), pch = c(NA, 1, 1), bty = 'n')

vandenman/DstarM documentation built on Nov. 3, 2021, 8:22 p.m.