dot-federateSSCP: Federated SSCP

In vanduttran/dsMOdual: Server Side Functions on XX' Sum of Squares and Cross Products Matrices

Federated SSCP

Description

Function for computing the federated SSCP matrix.

Usage

.federateSSCP(
  loginFD,
  logins,
  funcPreProc,
  querytables,
  byColumn = TRUE,
  scale = FALSE,
  chunk = 500L,
  mc.cores = 1,
  TOL = .Machine$double.eps,
  width.cutoff = 500L,
  connRes = FALSE
)

Arguments

loginFD	Login information of the FD server
logins	Login information of data repositories
funcPreProc	Definition of a function for preparation of raw data matrices. Two arguments are required: conns (list of DSConnection-classes), symbol (name of the R symbol) (see datashield.assign).
querytables	Vector of names of the R symbols to assign in the DataSHIELD R session on each server in logins. The assigned R variables will be used as the input raw data. Other assigned R variables in funcPreProc are ignored.
byColumn	A logical value indicating whether the input data is centered by column or row. Default, TRUE, centering by column, with constant variables across samples are removed. If FALSE, centering and scaling by row, with constant samples across variables are removed.
scale	A logical value indicating whether the variables should be scaled to have unit variance. Default, FALSE.
chunk	Size of chunks into what the resulting matrix is partitioned. Default, 500L.
mc.cores	Number of cores for parallel computing. Default, 1.
TOL	Tolerance of 0. Default, .Machine$double.eps.
width.cutoff	Default, 500L. See deparse1.
connRes	A logical value indicating if the connection to logins is returned. Default, FALSE, connections are closed.

vanduttran/dsMOdual documentation built on Jan. 19, 2025, 6:36 a.m.