Files in variani/lme4qtl

Linear mixed models with custom covariance matrices and restrictions on model parameters.

R/package.R R/plot.lib.R R/relmatAssoc.R R/relmatGlmer.R R/relmatLmer.R R/utils.lib.R R/varcov.R README.Rmd README.md demo/convergence.R demo/gwas.R demo/profile.R demo/se.R demo/simdat.R inst/models/01-random-slope-relmat.R inst/models/02-genetic-cor-poly.R inst/models/03-genetic-cor-toy.R man/lme4qtlPackage.Rd man/relmatGlmer.Rd man/relmatLmer.Rd man/varpropProf.Rd misc/issues/01/script.R misc/issues/03/01-rand1.R misc/issues/03/02-check-ids.R misc/issues/03/example_script.R misc/issues/05/01-repeated-glmer-pedigreemm.R misc/issues/05/02-repeated-sim-data.R misc/issues/07/01-profile-varprop.R misc/issues/07/02-gait2-dataset.R misc/issues/12/01-replicate-error.R misc/issues/16/01-predict.R misc/issues/20/01-models-misid.R misc/issues/22/cov-decomp.R misc/notes/confint.md misc/notes/datasets.md tests/testthat.R tests/testthat/test-formulas.R tests/testthat/test-input.R tests/testthat/test-lmerMultipoint.R tests/testthat/test-logLik.R tests/testthat/test-modular.R tests/testthat/test-polyslope.R tests/testthat/test-randslope.R tests/testthat/test-relfac.R tests/testthat/test-relmat.R tests/testthat/test-relmatGlmer.R tests/testthat/test-relmatLmer.R tests/testthat/test-relmatPolygenicBivar.R tests/testthat/test-repeated.R tests/testthat/test-scaleX.R tests/testthat/test-start.R tests/testthat/test-update.R vignettes/pedigreemm.Rmd