panel.Coo: Family picture of shapes

In vbonhomme/Momocs: Morphometrics using R

Family picture of shapes

Description

Plots all the outlines, side by side, from a Coo (Out, Opn or Ldk) objects.

Usage

panel(x, ...)

## S3 method for class 'Out'
panel(
  x,
  dim,
  cols,
  borders,
  fac,
  palette = col_summer,
  coo_sample = 120,
  names = NULL,
  cex.names = 0.6,
  points = TRUE,
  points.pch = 3,
  points.cex = 0.2,
  points.col,
  ...
)

## S3 method for class 'Opn'
panel(
  x,
  cols,
  borders,
  fac,
  palette = col_summer,
  coo_sample = 120,
  names = NULL,
  cex.names = 0.6,
  points = TRUE,
  points.pch = 3,
  points.cex = 0.2,
  points.col,
  ...
)

## S3 method for class 'Ldk'
panel(
  x,
  cols,
  borders,
  fac,
  palette = col_summer,
  names = NULL,
  cex.names = 0.6,
  points = TRUE,
  points.pch = 3,
  points.cex = 0.2,
  points.col = "#333333",
  ...
)

Arguments

x	The Coo object to plot.
...	additional arguments to feed generic plot
dim	for coo_listpanel: a numeric of length 2 specifying the dimensions of the panel
cols	A vector of colors for drawing the outlines. Either a single value or of length exactly equal to the number of coordinates.
borders	A vector of colors for drawing the borders. Either a single value or of length exactly equals to the number of coordinates.
fac	a factor within the $fac slot for colors
palette	a color palette
coo_sample	if not NULL the number of point per shape to display (to plot quickly)
names	whether to plot names or not. If TRUE uses shape names, or something for fac_dispatcher
cex.names	a cex for the names
points	logical (for Ldk) whether to draw points
points.pch	(for Ldk) and a pch for these points
points.cex	(for Ldk) and a cex for these points
points.col	(for Ldk) and a col for these points

Value

a plot

Note

If you want to reorder shapes according to a factor, use arrange.

See Also

Other Coo_graphics: inspect(), stack()

Examples

panel(mosquito, names=TRUE, cex.names=0.5)
panel(olea)
panel(bot, c(4, 10))
# an illustration of the use of fac
panel(bot, fac='type', palette=col_spring, names=TRUE)

vbonhomme/Momocs documentation built on Nov. 13, 2023, 8:54 p.m.