This package provides tools for the identification of submatrix of maximal sum. A submatrix is a rectangular, non-necessarily contiguous, subset of rows and of columns of a (larger) matrix. The submatrices that are searched for are max-sum submatrices. A submatrix is of maximal sum if the sum of its entires (selected from the original matrix) is of maximal sum. This package is a wrapper for the Scala implementation originally provided.
You are most likely to use mssm.search.cpgc()
for the seach.
You might require mssm.loadMatrix()
to load matrices into a Java
two-dimensionnal array of Double.
Alternatively, functons mssm.asJavaMatrix()
and mssm.fromJavaMatrix()
allows conversion fom R to Java and vice versa.
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