ggmanHighlight: Highlight points in Manhattan plot

In veera-dr/ggman: R package for Manhattan Plots

Description

Highlights a specific subset of points in the Manhattan plot

Usage

ggmanHighlight(ggmanPlot, highlight, colour = "red", ...)

Arguments

ggmanPlot	A ggman plot of class 'ggman'
highlight	A character vector of SNP ids to highlight
colour	highlight colour
...	other arguments passed to geom_point

Value

A manhattan plot with highlighted markers

Examples

p1 <- ggman(toy.gwas, snp = "snp", bp = "bp", chrom = "chrom",
pvalue = "pvalue")
ggmanHighlight(p1, highlight = toy.highlights)

veera-dr/ggman documentation built on May 3, 2019, 4:59 p.m.