PCMTreeListDescendants: A list of the descendants for each node in a tree
In venelin/PCMBase: Simulation and Likelihood Calculation of Phylogenetic Comparative Models
PCMTreeListDescendants R Documentation
A list of the descendants for each node in a tree
Description
A list of the descendants for each node in a tree
Usage
PCMTreeListDescendants(tree, tableAncestors = PCMTreeTableAncestors(tree))
Arguments
tree
a phylo object
tableAncestors
an integer matrix resulting from a call to
PCMTreeTableAncestors(tree).
Details
This function has time and memory complexity O(M^2), where M is the
number of nodes in the tree. It can take several minutes and gigabytes of
memory on trees of more than 10000 tips.
Value
a list with unnamed elements in the order of nodes in the tree. Each
element is an integer vector containing the descendant nodes (in increasing
order) of the node identified by its index-number in the list.
venelin/PCMBase documentation built on March 14, 2024, 8:24 p.m.
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| PCMTreeListDescendants | R Documentation |
A list of the descendants for each node in a tree
Description
A list of the descendants for each node in a tree
Usage
PCMTreeListDescendants(tree, tableAncestors = PCMTreeTableAncestors(tree))
Arguments
tree |
a phylo object |
tableAncestors |
an integer matrix resulting from a call to PCMTreeTableAncestors(tree). |
Details
This function has time and memory complexity O(M^2), where M is the number of nodes in the tree. It can take several minutes and gigabytes of memory on trees of more than 10000 tips.
Value
a list with unnamed elements in the order of nodes in the tree. Each element is an integer vector containing the descendant nodes (in increasing order) of the node identified by its index-number in the list.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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