mm10: GC percentages for mouse genome build mm10
In veseshan/pctGCdata: Datasets of GC percentages for human and mouse genomes
Description
Usage
Format
Details
Description
GC percentages in 1 kiolobase sliding windows along chromosomes 1-19,
X, Y & MT for mouse genome build mm10.
Usage
1
Format
A list containing 25 vectors corresponding to chromosomes 1-19, X, Y &
MT in that order. For example mm10[[7]] gives the GC percentage
for chromosome 7.
Details
GC percentage is the proportion of nucleotides that are GC in a 1000
base window. The windows begin with bases 1-1000 and slide 100 bases
at a time. See the function getGCpct to get GC percentages for
a subset of genomic positions.
veseshan/pctGCdata documentation built on May 3, 2019, 6:11 p.m.
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Description Usage Format Details
Description
GC percentages in 1 kiolobase sliding windows along chromosomes 1-19, X, Y & MT for mouse genome build mm10.
Usage
1 |
Format
A list containing 25 vectors corresponding to chromosomes 1-19, X, Y &
MT in that order. For example mm10[[7]] gives the GC percentage
for chromosome 7.
Details
GC percentage is the proportion of nucleotides that are GC in a 1000
base window. The windows begin with bases 1-1000 and slide 100 bases
at a time. See the function getGCpct to get GC percentages for
a subset of genomic positions.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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