pvalue: The differential gene expression table of limma output.

In vijaykumarmuley/findPvalueCutoff: Select Differentially Expressed Genes At False Positive Rate Less Than Five Percent

Description

A dataset containing the output of differential expression of 11,678 mouse genes assessed at embryonic day E10.5 compared to E9.5 of developing telnecephalon tissue. Rownames are ENSEMBL identifiers of genes

Usage

data(pvalue)

Format

A data frame with 11678 rows and 8 variables:

logFC

Log-fold change of a gene between comapred groups

AveExpr

Average expression of a gene across all groups

t

t-statistics

P.Value

P-value expression change of a gene between comapred groups

adj.P.Val

Adjusted p-value after multiple hypothesis testing using FDR method

B

B-statistics

gene

Gene symbol correposnding to ENSEMBL identifiers

genename

Gene name correposnding to ENSEMBL identifiers

Source

https://doi.org/10.1016/j.pneurobio.2019.101735

vijaykumarmuley/findPvalueCutoff documentation built on Dec. 23, 2021, 3:11 p.m.