USNAM_geno: Reduced genotype data maize US-NAM population
In vincentgarin/mppR: Multi-Parent Population QTL Analysis
USNAM_geno R Documentation
Reduced genotype data maize US-NAM population
Description
Selection of markers and genotypes from the maize US nested association mapping
(NAM) population (McMullen et al., 2009).
Usage
data(USNAM_geno)
Format
data.frame
Details
Sample of the marker matrix of the US-NAM population. The selection correspond
to 102 markers coming from the two first
chromosomes present in USNAM_map and the 506 genotypes. These
genotypes correspond to the selected phenotypic values in
USNAM_pheno. The selected genotypes come from
the following crosses: (B73 x CML103), (B73 x CML322), (B73 x CML52),
(B73 x Hp301), (B73 x M37W). The data of the 6 parental lines are
also included. The data are available on www.panzea.org.
Source
References
McMullen, M. D., Kresovich, S., Villeda, H. S., Bradbury, P., Li, H., Sun, Q.,
... & Buckler, E. S. (2009). Genetic properties of the maize nested association
mapping population. Science, 325(5941), 737-740.
See Also
USNAM_pheno, USNAM_map
Examples
data(USNAM_geno)
vincentgarin/mppR documentation built on March 13, 2024, 7:30 p.m.
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| USNAM_geno | R Documentation |
Reduced genotype data maize US-NAM population
Description
Selection of markers and genotypes from the maize US nested association mapping (NAM) population (McMullen et al., 2009).
Usage
data(USNAM_geno)Format
data.frame
Details
Sample of the marker matrix of the US-NAM population. The selection correspond
to 102 markers coming from the two first
chromosomes present in USNAM_map and the 506 genotypes. These
genotypes correspond to the selected phenotypic values in
USNAM_pheno. The selected genotypes come from
the following crosses: (B73 x CML103), (B73 x CML322), (B73 x CML52),
(B73 x Hp301), (B73 x M37W). The data of the 6 parental lines are
also included. The data are available on www.panzea.org.
Source
References
McMullen, M. D., Kresovich, S., Villeda, H. S., Bradbury, P., Li, H., Sun, Q., ... & Buckler, E. S. (2009). Genetic properties of the maize nested association mapping population. Science, 325(5941), 737-740.
See Also
USNAM_pheno, USNAM_map
Examples
data(USNAM_geno)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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