R/data.R

In vjcitn/BiocMetadataLab: explore metrics for sample annotation for genomic experiments

#' NCBI SRA publication date information for 6212 studies
#' @docType data
#' @format data.frame
"study_publ_dates"
#' names of fields used in 1009 cancer studies
#' @docType data
#' @format named vector
"bag_fields_ca1009"	
#' tibble with selected information from Genomic Data Commons dictionary
#' @docType data
#' @format tibble
"gdc_dx_sam"
#' vector of character strings representing study.abstracts from the 1009 cancer studies
#' @note 11 studies had no abstract and the title of the study is substituted.
#' @docType data
#' @format character vector
"absts_ca1009"
#' dates of 'Published' field for 1009 cancer studies (some were NA in study_publ_dates, remedied)
#' @docType data
#' @format named vector
"stud_dates_ca1009"