query_bb: query a bedbase bigbed file

Description Usage Arguments Value Examples

View source: R/queries.R

Description

query a bedbase bigbed file

Usage

1

Arguments

md5sum

character(1) md5sum used as key into bedbase resources

...

passed to rtracklayer::import.bb, which will have format="bigBed" set

Value

GRanges

Examples

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3
b1 = query_bb(md5sum="78c0e4753d04b238fc07e4ebe5a02984", 
    which=GenomicRanges::GRanges("chr17:37000000-39000000"))
b1

vjcitn/bedbaseRClient documentation built on June 15, 2021, 9:55 a.m.