Man pages for vjcitn/fatemapper
tools for working with cell fate maps
| CFMexplorer | Shiny app for interactive visualization of expression... |
| DmLandmarks | produce a data.frame with approximate landmarks of structures... |
| dmMapTerms | dmMapTerms: a data frame with 27 landmark symbols and... |
| exNmf21 | exNmf21: an NMFfit to the expressionPatterns of Dm blastoderm |
| expressionPatterns | expressionPatterns: 405 x 1640 data.frame of expression... |
| genebar | use a barplot to depict gene-oriented coefficients of a... |
| getXY | convert matrix representing values on a grid to coordinates... |
| ggBlast | use ggplot to render an image of a Drosophila blastocyst |
| matit | take an estimated basis vector from NMF and format to... |
| planiTerms | planiTerms: 17 landmark descriptions for the drosophila cell... |
| PP | PP: Wu et al. PNAS 2016 principal patterns |
| sPPcoefGenes | sPPcoefGenes: 21 x 701 data.frame with selected gene-specific... |
| sPPcoefPatterns | sPPcoefPatterns: 22 x 1640 data.frame with intercept and... |
| template405 | template405: 16 x 32 binary matrix, with zeroes outside the... |
| uniqueGenes | uniqueGenes: character vector of names of genes with... |
| vizRestriction | render a view of spatial expression pattern of a gene |
