vizRestriction: render a view of spatial expression pattern of a gene

In vjcitn/fatemapper: tools for working with cell fate maps

Description

render a view of spatial expression pattern of a gene

Usage

vizRestriction(edata, sym = "salm", tmpl = template405, threshold = 0.1)

Arguments

edata	a matrix or data frame with columns representing genes and rows representing spatially organized measures of expression
sym	gene symbol, a column name in edata
tmpl	template as used in matit
threshold	numeric value beneath which expression is regarded as absent

Examples

data(expressionPatterns)
data(template405)
vizRestriction(expressionPatterns, sym="salm")

vjcitn/fatemapper documentation built on May 3, 2019, 6:14 p.m.