bindSingleMetadata: for an htxapp download involving only one study, bind the...
In vjcitn/htxapp: prototype of metadata-driven selection in HumanTranscriptomeCompendium
Description
Usage
Arguments
Note
Description
for an htxapp download involving only one study, bind the sample.attributes information
to the colData
Usage
1
Arguments
se
a SummarizedExperiment instance
Note
htxapp returns a SummarizedExperiment instance with additional data.frames in the
metadata() list. For the case of one study returned, there is only one such data.frame
and it is clear how to combine the information in it with the metadata already in colData.
When multiple studies are selected, there will likely be different field sets in each
sample.attributes component, so build a unified colData requires manual work.
vjcitn/htxapp documentation built on May 20, 2019, 12:37 p.m.
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Description Usage Arguments Note
Description
for an htxapp download involving only one study, bind the sample.attributes information to the colData
Usage
1 |
Arguments
se |
a SummarizedExperiment instance |
Note
htxapp returns a SummarizedExperiment instance with additional data.frames in the metadata() list. For the case of one study returned, there is only one such data.frame and it is clear how to combine the information in it with the metadata already in colData. When multiple studies are selected, there will likely be different field sets in each sample.attributes component, so build a unified colData requires manual work.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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