vladpetyuk/simMSnSet: Simulation of MSnSet Objects

Utility to simulate quantitative proteomics data. Note, the simulations will be as realistic - as realistic the input parameters. Inference of parameters for a number of distributions describing quantitative proteomics data is in the plans. The set of current controling distributions allows to control for 1) sample bias (e.g. due to pipetting error), 2) missing values, 3) number of peptides per protein, 4) outlying samples, 5) outlying peptide identifications, 6) outlying measurements and 7) sample group effects.

Getting started

Package details

AuthorVlad Petyuk
Bioconductor views MassSpectrometry Proteomics
MaintainerVlad Petyuk <petyuk@gmail.com>
LicenseArtistic-2.0
Version0.0.2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("vladpetyuk/simMSnSet")
vladpetyuk/simMSnSet documentation built on May 3, 2019, 6:16 p.m.