Man pages for vsbuffalo/tasselr
S4 methods for working with HDF5 files from TASSEL
| alt | Accessor for alternate alleles |
| alt-TasselHDF5-method | Accessor for alterate alleles from a TasselHDF5 object |
| geno | Accessor for genotype matrix |
| geno-TasselHDF5-method | Accessor for genotype information from a TasselHDF5 object |
| granges-TasselHDF5-method | Accessor for genomic ranges from a TasselHDF5 object |
| initTasselHDF5 | Initialize a TasselHDF5 object, connected to an HDF5 file |
| loadBiallelicGenotypes | Load biallelic genotype information |
| loadBiallelicGenotypes-TasselHDF5-method | Load and decode biallelic genotypes from HDF5 file |
| ref | Accessor for reference alleles |
| ref-TasselHDF5-method | Accessor for reference alleles from a TasselHDF5 object |
| samples-TasselHDF5-method | Accessor for samples from a TasselHDF5 object |
| show-TasselHDF5-method | Pretty-print a TasselHDF5 object |
| TasselHDF5-class | An S4 class that stores links to Tassel HDF5 objects, loci... |
| tasselr | tasselr. |
