TasselHDF5-class: An S4 class that stores links to Tassel HDF5 objects, loci...
In vsbuffalo/tasselr: S4 methods for working with HDF5 files from TASSEL
Description
An S4 class that stores links to Tassel HDF5 objects, loci positions, and genotypes
Slots
filenamepath to HDF5 file
rangesa GenomicRanges object of loci
refa Tassel-encoded integer vector of reference alleles
alta Tassel-encoded IntegerList of alternate alleles
genotypesa matrix of bialleic genotypes
allele_statescharacter vector of allele states
samplessample names
versionstring Tassel version
vsbuffalo/tasselr documentation built on May 3, 2019, 7:08 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
An S4 class that stores links to Tassel HDF5 objects, loci positions, and genotypes
Slots
filenamepath to HDF5 file
rangesa
GenomicRangesobject of locirefa Tassel-encoded integer vector of reference alleles
alta Tassel-encoded
IntegerListof alternate allelesgenotypesa matrix of bialleic genotypes
allele_statescharacter vector of allele states
samplessample names
versionstring Tassel version
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.