calcNaturalMortality: Calculate natural mortality rates

In wStockhausen/shinyTC.CohortProgression: Package to simulate a Tanner crab cohort progression using Shiny

Description

Function to calculate natural mortality rates.

Usage

calcNaturalMortality(configInfo, input, verbose = FALSE)

Arguments

configInfo	- list created by setConfigInfo with model configuration elements
input	- list with natural mortality rate parameters and other information

Details

Returns a list with elements:<cr> <ul> <li> params - a list with input parameter values </li> <li> M_ms - a matrix of natural mortality rates indexed by maturity state and shell condition </li> <li> mdfrM_ms - a dataframe wtih the the same information </li> </ul>

The input list has elements:<cr> <ul> <li> pM - base natural mortality </li> <li> pDM1 - multiplier for immature crab </li> <li> pDM2 - multiplier for mature crab </li> </ul>

Value

list - list with M_ms as a matrix and as a dataframe (see @details )

wStockhausen/shinyTC.CohortProgression documentation built on July 19, 2021, 5:32 a.m.