adfg.ExportWideZCs: Export size compositions in wide format

In wStockhausen/tcsamFisheryDataADFG: Functions to process ADFG crab fishery data

Export size compositions in wide format

Description

Function to export size compositions in wide format.

Usage

adfg.ExportWideZCs(
  dfrSSs,
  dfrZCs,
  byFacs = c("fishery", "area", "sex", "shell condition", "year"),
  sizeCol = "size",
  valCol = "abundance",
  ssCol = "ss",
  csvSSs = "dfrSSs.csv",
  csvZCs = "dfrZCs.csv",
  writeFiles = TRUE,
  verbose = FALSE
)

Arguments

dfrSSs	dataframe with sample size information
dfrZCs	size composition dataframe
byFacs	character vector of size composition factors to include in ouptut
sizeCol	name of column in dfrZCs with sizes
valCol	name of column in dfrZCs with abundance values
ssCol	name of column in dfrSSs with sample sizes
csvSSs	name of csv file to save sample size to
csvZCs	name of csv file to save size compositions to
writeFiles	flag (T/F) to write csv files (default=TRUE)
verbose	flag (T/F) to print diagnostic information

Details

Uses sqldf::sqldf, reshape2::dcast, and wtsUtilities::Sum. Input column names should given "as is" and NOT be backquoted.

Value

A list with named elements

• tblZCs - the wide-format size compositions

• tblSSs - a dataframe with sample sizes

wStockhausen/tcsamFisheryDataADFG documentation built on April 18, 2023, 12:56 p.m.