API for waldronlab/MultiAssayExperiment.TCGA
Pipeline for the integration of multi-omics experiments in Bioconductor
| Global functions | |
|---|---|
| .findBarcodeCol | Source code |
| .getElementMetaData | Source code |
| .getSASToken | Source code |
| .loadClinicalData | Source code |
| .readClinical | Source code |
| .readClinicalCuration | Source code |
| .rowToDataFrame | Source code |
| .saveMethylHDF5 | Source code |
| buildMultiAssayExperiment | Man page Source code |
| cleanMerged | Source code |
| curationAvailable | Man page |
| dataDirectories | Man page Source code |
| downloadClinicalDrop | Source code |
| downloadDropbox | Source code |
| downloadExtraClinical | Source code |
| downloadSubtypeDrop | Source code |
| getClinicalData | Source code |
| getDataLinks | Source code |
| getDiseaseCodes | Man page Source code |
| loadData | Man page Source code |
| mergeSubtypeCuration | Source code |
| processClinicalFirehose | Source code |
| saveMapData | Source code |
| saveNupload | Man page Source code |
| saveRTCGAdata | Man page Source code |
| updateInfo | Man page Source code |
| uploadAzure | Man page Source code |
| writeClinicalData | Source code |
| writeMergedClinical | Source code |
