API for waldronlab/lefser
R implementation of the LEfSE method for microbiome biomarker discovery
| Global functions | |
|---|---|
| .appendRankLetter | Source code |
| .dropFeatures | Source code |
| .extractTips | Source code |
| .getTaxonomyFromPathStr | Source code |
| .isLefser | Source code |
| .pathString2EdgeList | Source code |
| .prepareDataHistogram | Source code |
| .return_no_results | Source code |
| .rowData2PathStrings | Source code |
| .selectPalette | Source code |
| .selectPathStrings | Source code |
| .selectTaxRanks | Source code |
| .sumDatHist | Source code |
| .toTree | Source code |
| .trunc | Source code |
| createUniqueValues | Source code |
| fillPmatZmat | Source code |
| filterKruskal | Source code |
| get_terminal_nodes | Man page Source code |
| lefser | Man page Source code |
| lefserClades | Man page Source code |
| lefserPlot | Man page Source code |
| lefserPlotClad | Man page Source code |
| lefserPlotFeat | Man page Source code |
| relativeAb | Man page Source code |
| rowNames2RowData | Man page Source code |
| wilcox_pstats | Source code |
| zeller14 | Man page |
