aid: Analysis of inoculation data

In wangqinhu/aid: an R package for the analysis of inoculation data

Description

Analysis and illustration of inoculation data.

Usage

aid(file, type, alternative = "two.sided", paired = FALSE, ...)

Arguments

file	a text file contains inoculation data.
type	grade, lesion or biomass (qPCR), must be specified
alternative	a character string specifying the alternative hypothesis, must be one of "two.sided" (default), "greater" or "less". You can specify just the initial letter.
paired	a character string specifying if the experiment is paired, can be TRUE or FALSE (default). You can specify just the initial letter.

Value

statistical analysis and illustration for inoculation data

See Also

grade.test, lesion.test, biomass.test, grade.barplot, lesion.barplot and biomass.barplot.

Examples

library(aid)
# grade data
demo1 <- system.file("extdata", "demo1.tsv", package="aid")
aid(demo1, type = "grade", alternative="less", paired=FALSE)
# lesion data
demo2 <- system.file("extdata", "demo2.tsv", package="aid")
aid(demo2, type = "lesion", alternative="two.sided", paired=FALSE)
# biomass data
demo3 <- system.file("extdata", "demo3.tsv", package="aid")
aid(demo3, type = "biomass", alternative="greater", paired=FALSE)

wangqinhu/aid documentation built on May 4, 2019, 12:58 a.m.