Man pages for warnes/exp.ssize
Estimate Effectivenes of Microarry Sample Size Estimation via Simulation
| calc.power.est | Calculate power and proportion of observations with power... |
| est.sd.ctrl | Estimate sd for a control sample matrix |
| FDR | Calculate FDR for a vector of p-values |
| get.cumsum | Get cumsum along columns for a matrix |
| get.sd | Function to Get sd from Inverse Variance |
| list.power.est | Calculate power for each set of sd in est.sd |
| power.real | Summarize test result in power |
| power.simu | Summarize the simulated power in a list |
| sample.dep | Simulate a sample of groups of dependent normal observations |
| sample.dep.2 | Simulate a sample of groups of dependent normal observations |
| sample.genes.dep | Simulate Observations Given the Covariance Matrix for Normal... |
| sample.genes.ind | Sample Observations (gene expressions) from Independent... |
| sample.genes.ind.2 | Sample Observations (gene expressions) from Independent... |
| sample.hyp.dep | Generate observations from each hypothesis (null/alternative)... |
| sample.hyp.ind | Function to Sample Observations(gene expressions) from... |
| sample.ind | Function to Sample Observations(gene expressions) from... |
| sampling.cov.matrix | Sample a covariance matrix from a list of cov matrices |
| sampling.cov.matrix.2 | Sample a list of covariance matrices that has the total... |
| simu.sample | Simulate a sample with normal distribution |
| simu.sample.est | Simulate a sample of control to estimate sd |
| simu.sample.real | Simulate a sample to do t test |
| t.decision.Bonf | Accept or reject hypotheses at specified alpha level for a... |
| tdecision.multiComp | Get the test decision based on FDR procedure or Bonferroni... |
| ttest.matrix | Compute running t-tests |
