correctCounts: correctCounts
In wckdouglas/correctMultiCount: Correcting multiply mapped counts
Description
Assigning multiply-mapped reads to most-abundantly-mapped locus
Usage
1
correctCounts(baseCount, multiCount)
Arguments
multiCount
should be a dataframe for storing multiply-mapped reads and their mapped locus.
**Columns named as 'fragment_id' for storing read id and 'gene_id' for storing gene_id
basecount:
should be a dataframe for storing gene count from uniquely-mapped reads
**Columns named as 'id' for gene_id and 'count' for counts
wckdouglas/correctMultiCount documentation built on May 4, 2019, 2:03 a.m.
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Description
Assigning multiply-mapped reads to most-abundantly-mapped locus
Usage
1 | correctCounts(baseCount, multiCount)
|
Arguments
multiCount |
should be a dataframe for storing multiply-mapped reads and their mapped locus. **Columns named as 'fragment_id' for storing read id and 'gene_id' for storing gene_id |
basecount: |
should be a dataframe for storing gene count from uniquely-mapped reads **Columns named as 'id' for gene_id and 'count' for counts |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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