filter.pca | Filter out PCs colinear with other covariates. |
GWAS | Perform GWA by GLM |
GWAS.by.GLM | Perform GWA by GLM using PCs and/or Other Covariates |
GWAS.GLM | GWAS.GLM: A package for performing genome-wide associations... |
make.pca | Perform Principle Component Analysis |
manhattan_plot | Generate a Manhattan Plot of a GWAS result |
qq_plot | Generate a Quantile-Quantile Plot of a GWAS result |
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