Files in weissmanlab/decotur
DeCoTUR (Detecting Coevolving Traits Using Relatives)
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/example-data.R
R/filter_traits_by_closepairs.R
R/get_classweights.R
R/get_closepair_classes.R
R/get_closepairs_distance.R
R/get_closepairs_fixednumber.R
R/get_closepairs_fraction.R
R/get_discordances.R
R/get_discordances_row.R
R/get_scores.R
R/get_scores_pa_closepairs.R
R/qpbinom_modified.R
README.md
data/example_distance_matrix.RData
data/example_trait_matrix.RData
decotur.Rproj
example_data/CC93_distmat.csv
example_data/CC93_gene_matrix.csv
man/get_classweights.Rd
man/get_closepair_classes.Rd
man/get_closepairs_auto.Rd
man/get_closepairs_distance.Rd
man/get_closepairs_fixednumber.Rd
man/get_closepairs_fraction.Rd
man/get_scores.Rd
man/get_scores_pa_close_pairs.Rd
man/hello.Rd
vignettes/.gitignore
vignettes/closepairs.Rmd
vignettes/vignette.Rmd
