get_closepair_classes: get_closepairs_classes
In weissmanlab/decotur: DeCoTUR (Detecting Coevolving Traits Using Relatives)
View source: R/get_closepair_classes.R
get_closepair_classes R Documentation
get_closepairs_classes
Description
This function takes a set of close pairs and sorts them into bushes (equivalence classes defined by the relation
of being a close pair). So if Samples 1 and 2 are close pairs and Samples 2 and 3 are close pairs, then Samples 1, 2, and 3
are all in the same close pair class.
Usage
get_closepair_classes(close_pairs)
Arguments
close_pairs
A matrix of close pairs; the output of get_closepairs_(distance, fraction, auto)
Examples
get_closepair_classes(close_pairs)
weissmanlab/decotur documentation built on Sept. 4, 2024, 6:49 a.m.
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View source: R/get_closepair_classes.R
| get_closepair_classes | R Documentation |
get_closepairs_classes
Description
This function takes a set of close pairs and sorts them into bushes (equivalence classes defined by the relation of being a close pair). So if Samples 1 and 2 are close pairs and Samples 2 and 3 are close pairs, then Samples 1, 2, and 3 are all in the same close pair class.
Usage
get_closepair_classes(close_pairs)
Arguments
close_pairs |
A matrix of close pairs; the output of get_closepairs_(distance, fraction, auto) |
Examples
get_closepair_classes(close_pairs)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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