attractome: List of attractors appears in several different cancer types.
In weiyi-bitw/cafr: Attractor Metagenes Finding Algorithm
Description
Usage
Format
References
Description
The object is a list of attractors obtained from different cancer types
(breast, colon and ovarian). The list was derived by generating the attractor
metagenes in 6 independant datasets and then compiling them into consensus
ranking after calculating the average MI of each gene across datasets.
Usage
1
Format
A list of 12 attractor metagenes. Each attractor metagene is represented by
a matrix with first column being the genes ranked by their average MI across
6 datasets.
References
Wei-Yi Cheng, Tai-Hsien Ou Yang and Dimitris Anastassiou, Biomolecular events in cancer revealed
by attractor metagenes, PLoS Computational Biology, Vol. 9, Issue 2, February 2013.
weiyi-bitw/cafr documentation built on May 4, 2019, 4:18 a.m.
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Description Usage Format References
Description
The object is a list of attractors obtained from different cancer types (breast, colon and ovarian). The list was derived by generating the attractor metagenes in 6 independant datasets and then compiling them into consensus ranking after calculating the average MI of each gene across datasets.
Usage
1 |
Format
A list of 12 attractor metagenes. Each attractor metagene is represented by a matrix with first column being the genes ranked by their average MI across 6 datasets.
References
Wei-Yi Cheng, Tai-Hsien Ou Yang and Dimitris Anastassiou, Biomolecular events in cancer revealed by attractor metagenes, PLoS Computational Biology, Vol. 9, Issue 2, February 2013.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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