API for welch16/Segvis
Segvis: A package for visualization of high throughput sequencing data along genomic segments
| Global functions | |
|---|---|
| .countReads | Source code |
| .dt2gr | Source code |
| .dt_cover | Source code |
| .dt_profile | Source code |
| .readFileCover | Source code |
| .rle_summit | Source code |
| .subset_region_cover | Source code |
| DT_profile | Man page Man page |
| DT_profile,SegvisData-method | Man page |
| DT_region | Man page Man page Man page |
| DT_region,SegvisData,GRanges-method | Man page |
| DT_region,SegvisData,numeric-method | Man page |
| SegvisData | Man page Source code |
| SegvisData-class | Man page Man page |
| bwd_covers | Man page Man page |
| bwd_covers,SegvisData-method | Man page |
| covers | Man page Man page |
| covers,SegvisData-method | Man page |
| files | Man page Man page |
| files,SegvisData-method | Man page |
| find_summits | Man page Man page |
| find_summits,SegvisData-method | Man page |
| frag_len | Man page Man page |
| frag_len,SegvisData-method | Man page |
| fwd_covers | Man page Man page |
| fwd_covers,SegvisData-method | Man page |
| is_pet | Man page Man page |
| is_pet,SegvisData-method | Man page |
| nreads | Man page Man page |
| nreads,SegvisData-method | Man page |
| overlap_matrix | Man page Man page |
| overlap_matrix,SegvisData,character-method | Man page |
| plot_heatmap | Man page Man page |
| plot_heatmap,SegvisData-method | Man page |
| plot_profile | Man page Man page |
| plot_profile,SegvisData-method | Man page |
| plot_region | Man page Man page Man page |
| plot_region,SegvisData,GRanges-method | Man page |
| plot_region,SegvisData,numeric-method | Man page |
| readBedFile | Man page Source code |
| segvis | Man page |
