find_summits-methods: find_summits method

In welch16/Segvis: Segvis: A package for visualization of high throughput sequencing data along genomic segments

Description

find_summits returns a numeric vector with the same length of the GRanges with the summits according to one of the files.

Usage

find_summits(object, ...)

## S4 method for signature 'SegvisData'
find_summits(object, which.file = 1,
  mc.cores = getOption("mc.cores", 2L))

Arguments

object	a SegvisData object.
...	Other parameters that may be used by find_summit.
which.file	a numeric value indicating which file is going to be used to calculate the summits. By default it takes the first file.
mc.cores	a numeric value with the number of cores to use, i.e. at most how many child processes will be run simultaneously.

Value

The find_summits method returns a numeric vector with the genomic coordinate with the summit in the GRanges according to one of the files in object.

See Also

SegvisData-class

welch16/Segvis documentation built on May 4, 2019, 4:18 a.m.