calc.kn1: Dissociation Rate Calculation
In whemphil/SMBalyze: A Package of Tools to Analyze Images from TIRF-Microscopy Single-Molecule Experiments
calc.kn1 R Documentation
Dissociation Rate Calculation
Description
A function to calculate dissociation rate from residence time data.
Usage
calc.kn1(path.to.file='./',file.name='Refined-Particle_Data.RData',use.auto.times='n',min.residence=0,max.residence=Inf)
Arguments
path.to.file
Path to the directory where the input file(s) are located. Write-out files will also be exported to this directory. DEFAULT = (working directory)
file.name
The name of the Rdata output file from the 'refine.particles' function. DEFAULT = 'Refined-Particle_Data.RData'.
use.auto.times
Should the automatcally called residence data, as opposed to manually selected, be used for analysis (y/n)? DEFAULT = 'n'.
min.residence
The minimum residence times to be included in analysis. DEFAULT = 0.
max.residence
The maximum residence times to be included in analysis. DEFAULT = Inf.
Value
Files:
Dissociation-Rate_Analysis.pdf
Graphs of the residence time distribution data.
whemphil/SMBalyze documentation built on April 16, 2023, 6:26 p.m.
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| calc.kn1 | R Documentation |
Dissociation Rate Calculation
Description
A function to calculate dissociation rate from residence time data.
Usage
calc.kn1(path.to.file='./',file.name='Refined-Particle_Data.RData',use.auto.times='n',min.residence=0,max.residence=Inf)
Arguments
path.to.file |
Path to the directory where the input file(s) are located. Write-out files will also be exported to this directory. DEFAULT = (working directory) |
file.name |
The name of the Rdata output file from the 'refine.particles' function. DEFAULT = 'Refined-Particle_Data.RData'. |
use.auto.times |
Should the automatcally called residence data, as opposed to manually selected, be used for analysis (y/n)? DEFAULT = 'n'. |
min.residence |
The minimum residence times to be included in analysis. DEFAULT = 0. |
max.residence |
The maximum residence times to be included in analysis. DEFAULT = Inf. |
Value
Files:
Dissociation-Rate_Analysis.pdf |
Graphs of the residence time distribution data. |
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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